University of Southern California
(2024) William Y. C. Huang, James E. Ferrell, and Xianrui Cheng. Measuring Molecular Diffusion in Self-Organizing Xenopus Extracts by Fluorescence Correlation Spectroscopy. In: Castro, A., Lacroix, B. (eds) Cell Cycle Control. Methods in Molecular Biology Vol 2740. Humana, New York, NY. (doi:10.1007/978-1-0716-3557-5_6)
(2022) Cytoplasmic organization promotes protein diffusion in Xenopus extracts.
William Y. C. Huang, Xianrui Cheng* and James E. Ferrell*.
Nature Communications 13, 5599. (doi:10.1038/s41467-022-33339-0)
William Y. C. Huang, Xianrui Cheng* and James E. Ferrell*.
Nature Communications 13, 5599. (doi:10.1038/s41467-022-33339-0)
(2021) Xenopus laevis egg extract preparation and live imaging methods for visualizing dynamic cytoplasmic organization.
Xianrui Cheng* and James E. Ferrell.
Journal of Visualized Experiments 172, e61923. (doi:10.3791/61923)
Xianrui Cheng* and James E. Ferrell.
Journal of Visualized Experiments 172, e61923. (doi:10.3791/61923)
Stanford University (where Xianrui was a postdoc)
(2019) Spontaneous emergence of cell-like organization in Xenopus egg extracts.
Xianrui Cheng* and James E. Ferrell*.
Science 366, 631-637. (doi:10.1126/science.aav7793)
Xianrui Cheng* and James E. Ferrell*.
Science 366, 631-637. (doi:10.1126/science.aav7793)
(2018) Apoptosis propagates through the cytoplasm as trigger waves.
Xianrui Cheng and James E. Ferrell.
Science 361, 607-612. (doi:10.1126/science.aah4065)
Xianrui Cheng and James E. Ferrell.
Science 361, 607-612. (doi:10.1126/science.aah4065)
Duke University (where Xianrui was a graduate student)
(2014) Regulatory logic and pattern formation in the early sea urchin embryo.
Mengyang Sun, Xianrui Cheng, and Joshua E. S. Socolar.
Journal of Theoretical Biology 363: 80-92 (doi:10.1016/j.jtbi.2014.07.023)
Mengyang Sun, Xianrui Cheng, and Joshua E. S. Socolar.
Journal of Theoretical Biology 363: 80-92 (doi:10.1016/j.jtbi.2014.07.023)
(2014) Delayed transition to new cell fates during cellular reprogramming.
Xianrui Cheng, Deirdre C. Lyons, Joshua E. S. Socolar, and David R. McClay.
Developmental Biology 391: 147-157 (doi:10.1016/j.ydbio.2014.04.015)
Xianrui Cheng, Deirdre C. Lyons, Joshua E. S. Socolar, and David R. McClay.
Developmental Biology 391: 147-157 (doi:10.1016/j.ydbio.2014.04.015)
(2013) Causal structure of oscillations in gene regulatory networks: Boolean analysis of ODE attractors.
Mengyang Sun, Xianrui Cheng, and Joshua E. S. Socolar.
Chaos 23: 025104 (doi:10.1063/1.4807733)
Mengyang Sun, Xianrui Cheng, and Joshua E. S. Socolar.
Chaos 23: 025104 (doi:10.1063/1.4807733)
(2013) Autonomous Boolean modelling of developmental gene regulatory networks.
Xianrui Cheng*, Mengyang Sun, and Joshua E. S. Socolar.
Journal of the Royal Society Interface 10: 20120574 (doi:10.1098/rsif.2012.0574)
Xianrui Cheng*, Mengyang Sun, and Joshua E. S. Socolar.
Journal of the Royal Society Interface 10: 20120574 (doi:10.1098/rsif.2012.0574)
*Corresponding author